===================================== Force field parameters from Lipidbook ===================================== Parameter files in this zip file were downloaded from lipidbook.bioch.ox.ac.uk. Linked parameters need to be manually downloaded via the links in links.txt. Always cite the primary reference(s) for the parameters, which can be found at the end of this file. Please cite Lipidbook in your published work with the reference J. Domanski, P. Stansfeld, M.S.P. Sansom, and O. Beckstein. Lipidbook: A Public Repository for Force Field Parameters Used in Membrane Simulations. J. Membrane Biol. 236 (2010), 255--258. doi:10.1007/s00232-010-9296-8. URL:http://lipidbook.bioch.ox.ac.uk License: Fair Use (http://www.copyrightservice.co.uk/copyright/p09_fair_use) NOTE: The licence REQUIRES that you cite the primary reference when you use and/or modify these files. See the link under Licence for details. Overview ======== Lipid: 1,2-dipalmitoyl-sn-glycero-3-phosphocholine (DPPC) Forcefield: GROMOS43a1 Code: Gromacs Version: 1 (created: 11-12-2009, last update: 11-12-2009) Curator: Phill Stansfeld Lipidbook URL: http://lipidbook.bioch.ox.ac.uk/version/show/id/41.html File manifest ============= Downloaded files are listed with SHA1 checksums. You can compute the checksums of the downloaded files (e.g. with the 'openssl sha1' or the 'sha1sum' commands) and compare them to the listed ones. If they agree you have verified the files; it also allows a simple check of which files changed between versions. dppc-G9643a1.itp : 8cb89c568e24aadc76ce0b2edd358210929c2ece dppc-structure.pdb : 2c5571e1021df99533142fb2d948f0b15da215d7 dppc.pdb : cb1392de960b689f1ce670ed61e27d38357bbe42 SHA1 of all files : 36acb79436ef1ac7af0d18d98eb34afb8f43a58c Primary reference(s) =================== Please always credit the original authors of the parameters by citing these papers: Title: Molecular dynamics simulations of a fluid bilayer of dipalmitoylphosphatidylcholine at full hydration, constant pressure, and constant temperature. Authors: Berger O, Edholm O, Jähnig F Journal: Biophys J Year: 1997 Volume: 72 Page: 2002-13 pubmed id: 9129804 doi: 10.1016/S0006-3495(97)78845-3 Additional notes: - Title: - Authors: Tieleman DP Journal: - Year: - Volume: - Page: - pubmed id: doi: Additional notes: (unpublished)