===================================== Force field parameters from Lipidbook ===================================== Parameter files in this zip file were downloaded from lipidbook.bioch.ox.ac.uk. Linked parameters need to be manually downloaded via the links in links.txt. Always cite the primary reference(s) for the parameters, which can be found at the end of this file. Please cite Lipidbook in your published work with the reference J. Domanski, P. Stansfeld, M.S.P. Sansom, and O. Beckstein. Lipidbook: A Public Repository for Force Field Parameters Used in Membrane Simulations. J. Membrane Biol. 236 (2010), 255--258. doi:10.1007/s00232-010-9296-8. URL:http://lipidbook.bioch.ox.ac.uk License: CC-Attribute-ShareAlike 3.0 (cc-by-sa-3.0 http://creativecommons.org/licenses/by-sa/3.0/) NOTE: The licence REQUIRES that you cite the primary reference when you use and/or modify these files. See the link under Licence for details. Overview ======== Lipid: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphoethanolamine (POPE) Forcefield: GROMOS-CKP Code: Gromacs Version: 1 (created: 22-05-2012, last update: 22-05-2012) Curator: Tom Piggot Lipidbook URL: http://lipidbook.bioch.ox.ac.uk/version/show/id/82.html File manifest ============= Downloaded files are listed with SHA1 checksums. You can compute the checksums of the downloaded files (e.g. with the 'openssl sha1' or the 'sha1sum' commands) and compare them to the listed ones. If they agree you have verified the files; it also allows a simple check of which files changed between versions. POPE_GROMOS-CKP.itp : a467e89daaf62497d4def0b58fb8fdcfb095c056 links.txt : adc83b19e793491b1c6ea0fd8b46cd9f32e592fc md-POPE_200ns.gro : 68e30228785944aeb3668b6ad43f5497f2729e2d SHA1 of all files : ed8615b7a406638e6074958308e768abb4610080 Primary reference(s) =================== Please always credit the original authors of the parameters by citing these papers: Title: Electroporation of the E. coli and S. aureus membranes: molecular dynamics simulations of complex bacterial membranes. Authors: Piggot TJ, Holdbrook DA, Khalid S Journal: J Phys Chem B Year: 2011 Nov 17 Volume: 115 Page: 13381-8 pubmed id: 21970408 doi: 10.1021/jp207013v Additional notes: -